What is RNA splicing презентация

Genetic information is transferred from genes to the proteins they encode via a “messenger” RNA intermediate

Слайд 1What is RNA splicing?


Слайд 2Genetic information is transferred from genes to the proteins they encode

via a “messenger” RNA intermediate

Слайд 3Most genes have their protein-coding information interrupted by non-coding sequences called

“introns”. The coding sequences are then called “exons”

Слайд 4The intron is also present in the RNA copy of the

gene and must be removed by a process called “RNA splicing”

Слайд 5Splicing a pre-mRNA involves two reactions
pre-mRNA


intron branchpoint

A


Слайд 6Splicing occurs in a “spliceosome” an RNA-protein complex (simplified)

spliceosome
(~100 proteins + 5

small RNAs)

Splicing works similarly in different organisms, for example in yeast, flies, worms, plants and animals.


Слайд 7RNA is produced in the nucleus of the cell. The mRNA

has to be transported to the cytoplasm to produce proteins

Ribosomes are RNA-protein machines that make proteins, translating the coding information in the mRNA


Слайд 8Pre-messenger RNA Processing
cytoplasm
nucleus
cap
poly(A) tail


Слайд 9Alternative splicing In humans, many genes contain multiple introns
Usually all introns must

be removed before the mRNA can be translated to produce protein

Слайд 10However, multiple introns may be spliced differently in different circumstances, for

example in different tissues.

Thus one gene can encode more than one protein. The proteins are similar but not identical and may have distinct properties. This is important in complex organisms

pre-mRNA


Слайд 11Different signals in the pre-mRNA and different proteins cause spliceosomes to

form in particular positions to give alternative splicing

We are studying how mRNAs and proteins interact in order to understand how these machines work in general and, in particular, how RNA splicing is regulated as it affects which proteins are produced in each cell and tissue in the body.


Слайд 12APOPTOSIS

Alternative splicing can generate mRNAs encoding proteins with
different, even opposite functions
(programmed
cell

death)

(+)

(-)


Слайд 13Alternative splicing can generate tens of thousands of mRNAs
from a

single primary transcript

Combinatorial selection of one exon at each of four variable regions generates more than
38,000 different mRNAs and proteins in the Drosophila cell adhesion molecule Dscam

The protein variants are important for wiring of the nervous system and for immune response

protein

mRNA

pre-mRNA


Слайд 14Examples of the potential consequences of mutations on splicing
Mutations occur
on

the DNA
(in a gene)

mutation A
truncated mRNA

mutation B
exon 3 skipped

mutation C
longer exon 4

no mutation
normal mRNA

normal protein
active

truncated protein
inactive

protein of different size (smaller or longer)
inactive or aberrant function


Слайд 15Pathologies resulting from aberrant splicing can be grouped in two major

categories

 Mutations affecting proteins that are involved in splicing
Examples: Spinal Muscular Atrophy
Retinitis Pigmentosa
Myotonic Dystrophy

 Mutations affecting a specific messenger RNA and disturbing its normal splicing pattern
Examples: ß-Thalassemia
Duchenne Muscular Dystrophy
Cystic Fibrosis
Frasier Syndrome
Frontotemporal Dementia and Parkinsonism



Слайд 16Therefore, understanding the mechanism of RNA splicing in normal cells and

how it is regulated in different tissues and at different stages of development of an organism is essential in order to develop strategies to correct aberrant splicing in human pathologies

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